Skills4EOSC fellowship

This is a guest blog post from Clara Parente Boavida, about her fellowship with the Research Data Service as part of a European Open Science Cloud (EOSC) project.

My name is Clara Parente Boavida and I work in the Research Support Office at Iscte-Instituto Universitario de Lisboa (Portugal). I applied for the first call of the Skills4EOSC Fellowship Programme and between 11th March to 5th April I worked with an amazing team at Research Data Service at the University of Edinburgh.

The Skills4EOSC Fellowship Programme aims to address the need to promote and sustain professional roles dedicated to open research by supporting short-term secondments.

Among the three different types of fellowships, I have chosen a Research Data Support internship. This placement allowed me to actively participate in the day-to-day activities related to research data support, providing an immersive experience and a comprehensive understanding of research data management practices within the host institution.

I would like to congratulate the Skills4EOSC project for this initiative and thank everyone who has helped to make this opportunity possible. I’m grateful for the support of my institution (Vice-Rector Jorge Costa and Carina Cunha), I’m grateful to Robin Rice for the extraordinary welcome and I’m grateful to all the people I’ve had the opportunity to talk to and interact with during this month.

“the essential is invisible to the eyes”
Antoine de Saint-Exupéry’s novel “The Little Prince”

Each week’s agenda was carefully prepared with my expectations and interests in mind. The University of Edinburgh has a busy life in terms of Research Data Management. Not only in collaboration with various services within the University, but also with the external community. This holistic view has made me reflect about the different services that Research Data Management intersects with. Success comes from healthy and effective relationships with different stakeholders.

Photo collage of Clara's activities in Edinburgh.

I was involved in the day-to-day activities of different members of the team, and each experience added something new. I had the opportunity to attend face-to-face events, one-to-one meetings, kick-off meetings, as well as online meetings and events. I also took part in internal team meetings and service meetings. Informal activities were carefully planned to allow the Research Data Service team to interact with each other and to allow other teams to be involved.

I had one-to-one meetings with each member of the Research Data Support team about: DataShare, DataVaut, training programme, DMP, DMPonline, Research Data Management Policy and Metrics. I had one-to-one meetings with members of other teams: Open Research, Scholarly Communications, Research Information Systems, Digital Research Services, and Edinburgh Research Office.

I attended a number of events in person: Digital Research Lunchtime Seminar: How to interpret and analyse your data efficiently; Open Research Scotland Meeting; Open Science Framework Workshop Modules 1, 2, 3 & 4; Ethics & Data Management at the Childlight GDF Residency; Technomoral Conversations: Who is Responsible for Responsible AI?; Library Tour for Staff, and Digital Research Lunchtime Seminar: Manage, publish, share and preserve.

I also participated in online events: Updating the DataCite Metadata Scheme webinar; UK Research Network (UKRN) webinar on Indicators for Open Research; UKRN Indicators Pilot 2 online meeting; UKRN Pilot 1 kick-off meeting; Writing a Data management plan, for the Health in Social Science School; and Working with Personal and Sensitive Data. I also had the opportunity to organise an online meeting with Mike Wallis (Research Services, IT Infrastructure) and the IT Services of Iscte to answer questions about DataStore.

In terms of personal contributions, I wrote suggestions for updates to MANTRA Unit 1, part of an open access Research Data Management Training course. I had the opportunity to demonstrate the interoperability process between CRIS systems and OpenAIRE, and also how to link EC funded projects to publications and datasets.

Finally, I designed a Research Data Management Roadmap for the Iscte. This roadmap intends to guide the work to be developed over the next three years towards the implementation of a RDM Service for the Iscte-Instituto Universitário de Lisboa. It incorporates lessons learned during the Skills4EOSC Fellowship Programme at the University of Edinburgh. It is also aligned with the Human Resources Excellence in Research Award (HRS4R) principles for researchers, which is a mechanism through which the European Commission seeks to ensure that concrete steps are put in place by institutions to enhance working conditions for researchers across Europe, as set out in the European Charter and Code.

Open Research Support at Russell Group Universities

As part of my work as Research Data Steward, I was asked by our Open Research Co-ordinator to investigate the open research support available at Russell Group universities and how the University of Edinburgh compares.[1] Open research, which is also known as “open science” or “open scholarship”, refers to a collection of practices and principles around transparency, reproducibility and integrity in research. To understand to what extent Russell Group universities have adapted to the ongoing development of open science, we have conducted analysis in terms of four areas. Do they have a published policy around Open Research? Do they have an Open Research Roadmap? Do they mention any training or specific support for researchers in achieving Open Research? What services do they provide to support Open Research?

Firstly, we checked whether those universities have a policy/statement that outlines the university’s approach to support open research and key principles for researchers. Less than 30% of these universities have a clear policy or statement for Open Research. Good examples include the University of Cambridge,[2] University of Sheffield,[3] and Cardiff University.[4]

Secondly, we checked whether they have a Roadmap that provides a set of questions that universities can use to monitor their progress in implementing Open Science principles, practices and policies at a local level. Among the Russell Group members, University of Edinburgh and University College London – two members of the League of European Research Universities (LERU) [5] provide a roadmap/page dedicated to monitor their progress. (Ours can be found on this Open Research page.)

Facets of open researchThirdly,what services are provided to researchers to make their work public? Most universities provide support like a data repository (except for LSE), Research Data Management support, Open Access to publications and thesis and guidance on sharing research software. A few provide support on protocols sharing. Some universities have started hosting an open research conference. For example, UCL Open Science Conference 2021, 2022,[6] Open Research Symposium hosted by the University of Southampton,[7] and University Open Research Conference, June 2021, at the University of Birmingham.[8] As an active member of LERU, our university also joined in to launch our first Edinburgh Open Research Conference in May, 2022.

Lastly, we have found all universities have training relevant to open research, with around half of them clearly advertising their training. Some good examples which we could learn from include the “Open Research education for doctoral students” from Imperial College[9]  and a practical libguide for open research provided by the University of York[10].

We are glad to see that Russell Group members have started adopting actions to support Open research, which is considered part of the new normal for research-intensive universities. However, this is a long and ongoing process. We have seen that many universities are still in the early stages of the implementation process and more can be done to advance their practice, including ours.

Yue Gu
Research Data Steward

Footnotes
[1] https://russellgroup.ac.uk/about/our-universities/
[2] https://osc.cam.ac.uk/open-research-position-statement
[3] https://www.sheffield.ac.uk/openresearch/university-statement-open-research
[4] https://www.cardiff.ac.uk/documents/2519297-open-research-position-statement
[5] https://www.leru.org/publications/implementing-open-science
[6] See the UCL Blog post for more information. https://blogs.ucl.ac.uk/open-access/2022/03/15/bookings-now-open-for-ucl-open-science-conference-2022/
[7] https://library.soton.ac.uk/openaccess/Plan_S_open_research_symposium
[8] See https://intranet.birmingham.ac.uk/as/libraryservices/library/research/open-research.aspx
[9] https://www.imperial.ac.uk/research-and-innovation/support-for-staff/scholarly-communication/open-research/open-research-education/
[10] https://subjectguides.york.ac.uk/openresearch/home

End of an era – 2017-2020 RDM Roadmap Review (part 1)

Looking back on three years that went into completing our RDM Roadmap in this period of global pandemic and working from home, feels a bit anti-climactic. Nevertheless, the previous three years have been an outstanding period of development for the University’s Research Data Service, and research culture has changed considerably toward openness, with a clearer focus on research integrity. Synergies between ourselves as service providers and researchers seeking RDM support have never been stronger, laying a foundation for potential partnerships in future.

thumbnail image of poster

FAIR Roadmap Review Poster

A complete review was written for the service steering group in October last year (available on the RDM wiki to University members). This was followed by a poster and lightning talk prepared for the FAIR Symposium in December where the aspects of the Roadmap that contributed to FAIR principles of research data (findable, accessible, interoperable, reusable) were highlighted.

The Roadmap addressed not only FAIR principles but other high level goals such as interoperability, data protection and information security (both related to GDPR), long-term digital preservation, and research integrity and responsibility. The review examined where we had achieved SMART-style objectives and where we fell short, pointing to gaps either in provision or take-up.

Highlights from the Roadmap Review

The 32 high level objectives, each of which could have more than one deliverable, were categorised into five categories. In terms of Unification of the Service there were a number of early wins, including a professionally produced short video introducing the service to new users; a well-designed brochure serving the same purpose; case study interviews with our researchers also in video format – a product of a local Innovation Grant project; and having our service components well represented in the holistic presentation of the Digital Research Services website.

Gaps include the continuing confusion about service components starting with the name ‘Data’___ [Store, Sync, Share, Vault]; the delay of an overarching service level definition covering all components; and the ten-year old Research Data Policy. (The policy is currently being refreshed for consultation – watch this space.)

A number of Data Management Planning goals were in the Roadmap, from increasing uptake, to building capacity for rapid support, to increasing the number of fully costed plans, and ensuring templates in DMPOnline were well tended. This was a mixed success category. Certainly the number of people seeking feedback on plans increased over time and we were able to satisfy all requests and update the University template in DMPOnline. The message on cost recovery in data management plans was amplified by others such as the Research Office and school-based IT support teams, however many research projects are still not passing on RDM costs to the funders as needed.

Not many schools or centres created DMP templates tailored to their own communities yet, with the Roslin Institute being an impressive exception; the large majority of schools still do not mandate a DMP with PhD research proposals, though GeoSciences and the Business School have taken this very seriously. The DMP training our team developed and gave as part of scheduled sessions (now virtually) were well taken up, more by research students than staff. We managed to get software code management into the overall message, as well as the need for data protection impact assessments (DPIAs) for research involving human subjects, though a hurdle is the perceived burden of having to conduct both a DPIA and a DMP for a single research project. A university-wide ethics working group has helped to make linkages to both through approval mechanisms, whilst streamlining approvals with a new tool.

In the category of Working with Active Data, both routine and extraordinary achievements were made, with fewer gaps on stated goals. Infrastructure refreshment has taken place on DataStore, for which cost recovery models have worked well. In some cases institutes have organised hardware purchases through the central service, providing economies of scale. DataSync (OwnCloud) was upgraded. Gitlab was introduced to eventually replace Subversion for code versioning and other aspects of code management. This fit well with Data and Software Carpentry training offered by colleagues within the University to modernise ways of doing coding and cleaning data.

A number of incremental steps toward uptake of electronic notebooks were taken, with RSpace completing its 2-year trial and enterprise subscriptions useful for research groups (not just Labs) being managed by Software Services. Another enterprise tool, protocols.io, was introduced and extended as a trial. EDINA’s Noteable service for Jupyter Notebooks is also showcased.

By far and away the most momentous achievement in this category was bringing into service the University Data Safe Haven to fulfil the innocuous sounding goal of “Provide secure setting for sensitive data and set up controls that meet ISO 27001 compliance and user needs.” An enormous effort from a very small team brought the trusted secure environment for research data to a soft launch at our annual Dealing with Data event in November 2018, with full ISO 27001 standard certification achieved by December 2019. The facility has been approved by a number of external data providers, including NHS bodies. Flexibility has been seen as a primary advantage, with individual builds for each research project, and the ability for projects to define their own ‘gatekeeping’ procedures, depending on their requirements. Achieving complete sustainability on income from research grants however has not proven possible, given the expense and levels of expertise required to run this type of facility. Whether the University is prepared to continue to invest in this facility will likely depend on other options opening up to local researchers such as the new DataLoch, which got its start from government funding in the Edinburgh and South East Scotland region ‘city deal’.

As for gaps in the Working with Data category, there were some expressions of dissatisfaction with pricing models for services offered under cost recovery although our own investigation found them to be competitively priced. We found that researchers working with external partners, especially in countries with different data protection legislation, continue to find it hard work to find easy ways to collaborate with data. Centralised support for databases was never agreed on by the colleges because some already have good local support. Encryption is something that could benefit from a University key management system but researchers are only offered advice and left to their own mechanisms not to lose the keys to their research treasures; the pilot project that colleagues ran in this area was unfortunately not taken forward.

In part 2 of this blog post we will look at the remaining Roadmap categories of Data Stewardship and Research Data Support.

Robin Rice
Data Librarian and Head of Research Data Support
Library and University Collections

DataVault – larger deposits and new review process notifications

New deposit size limit: 10TB

Great news for DataVault users: you can now deposit up to a whopping ten terabytes in a single deposit in the Edinburgh DataVault! That’s five times greater than the previous deposit limit, saving you time that might have been wasted splitting your data artificially and making multiple deposits.

It’s still a good idea to divide up your data into deposits that correspond well to whatever subsets of the dataset you and your colleagues are likely to want to retrieve at any one time. That’s because you can only retrieve a single deposit in its entirety; you cannot select individual files in the deposit to retrieve. Smaller deposits are quicker to retrieve. And remember you’ll need enough space for the retrieved data to arrive in.

We’ve made some performance improvements thanks to our brilliant technical team, so depositing now goes significantly faster. Nonetheless, please bear in mind that any deposit of multiple terabytes will probably take several days to complete (depending on how many deposits are queueing and some characteristics of the fileset), because the DataVault needs time to encrypt the data and store it on the tape archives and into the cloud. Remember not to delete your original copy from your working area on DataStore until you receive our email confirming that the deposit has completed!

And you can archive as many deposits as you like into a vault, as long as you have the resources to pay the bill when we send you the eIT!

A reminder on how to structure your data:
https://www.ed.ac.uk/information-services/research-support/research-data-service/after/datavault/prepare-datavault/structure

 Ensuring good stewardship of your data through the review process

Another great feature that’s now up and running is the review process notification system, and the accompanying dashboard which allows the curators to implement decisions about retaining or deleting data.

Vault owners should receive an email when the chosen review date is six months away, seeking your involvement in the review process. The email will provide you with the information you need about when the funder’s minimum retention period (if there is one) expires, and how to access the vault. Don’t worry if you think you might have moved on by then; the system is designed to allow the University to implement good stewardship of all the data vaults, even when the Principal Investigator (PI) is no longer contactable. Our curators use a review dashboard to see all vaults whose review dates are approaching, and who the Nominated Data Managers (NDMs) are. In the absence of the Owner, the system notifies the NDMs instead. We will consult with the NDMs or the School about the vault, to ensure all deposits that should be deleted are deleted in good time, and all deposits that should be kept longer are kept safe and sound and still accessible to all authorised users.

DataVault Review Process:
https://www.ed.ac.uk/information-services/research-support/research-data-service/after/datavault/review-process 

The new max. deposit size of 10 TB is equivalent to over five million images of around 2 MB each – that’s one selfie for every person in Scotland. Image: A selfie on the cliffs at Bell Hill, St Abbs
cc-by-sa/2.0 – © Walter Baxter – geograph.org.uk/p/5967905

Pauline Ward
Research Data Support Assistant
Library & University Collections