Tag Archives: open data

DataShare spotlight: Human MotionLess Dataset (HuMoLs) and the creative potential of research data

Posted on by
Reply

For the second installment of the spotlight on DataShare blog posts, I would like to showcase a fascinating item containing videos of people not doing anything!

The dataset in question is titled “Human MotionLess Dataset (HuMoLs)” and was created by researchers Longfei Chan, Muhammad Ahmed Raza and Robert Fisher, who are based in the School of Informatics’ Institute of Perception Action and Behaviour. While on the face of it, people being still might not seem very dynamic, the research behind this dataset is trying to solve a difficult problem with a very useful outcome. Simply put, how do you tell when someone is lying still because they are doing something like sleeping, or if it is because they are unwell or have fallen? The videos in this dataset aim to try and train healthcare monitoring systems to help determine whether it is the former or the latter of these possibilities, with the priority being to uncover any critical medical conditions or to analyse chronic conditions.

A selection of still images taken from the videos in the dataset.

What struck me while reviewing the videos for submission was that beyond the usefulness of these videos to the research project, there was the potential for them to be adapted creatively. The videos have a deliberately “uncanny valley” aspect, due to using AI to deepfake participant’s faces in order to preserve their anonymity. The amusingly odd character to the videos made me imagine them being used in an Adam Curtis documentary, or in an Aphex Twin music video. Possibly even in an Adam Curtis documentary with Aphex Twin music over the top of it.

This raises the fascinating idea that there are rich sources of research data stored in open access repositories that could have a life beyond being reproducible, but could also be reused, repurposed and remixed into creative new pieces, adding value to both the research itself, and to the repositories where the affiliated data is stored. To demonstrate this possibility, I have edited some of the videos together, see below, and set them to music. The piece of music, “Redolescence” by Other Lands, has a dreamlike quality to it which both complements and recontextualises the videos into something beyond their originally intended use.

What other audio and visual materials are there contained in research data repositories waiting to be repurposed in a creative manner? Time (and much more talented creators than me) will tell!

The full dataset can be found on DataShare: Human MotionLess Dataset (HuMoLs)

The paper which the dataset supports: OPPH: A Vision-Based Operator for Measuring Body Movements for Personal Healthcare

Permission to use the music featured in this video was kindly granted by Gavin Sutherland, performing here under his artist name of Other Lands. The album which contains this track can be purchased on Bandcamp: Other Lands – Riddle of the Mode 

DataShare spotlight: History, Classics and Archaeology in DataShare

Posted on by
Reply

To celebrate World Digital Preservation Day 2024, this is the first in a series of occasional blog posts which seek to shine a light on some interesting examples of datasets uploaded to DataShare, the University of Edinburgh’s open access data repository.

Research data that is deposited in DataShare comes from across the Colleges and Schools and can relate to cutting-edge scientific research or exploration of under-studied social worlds, however, we also receive valuable historical research data too!

A prime example of this is an item submitted by Professor Charles West, who is based in the School of History, Classics and Archaeology, titled “Autun List of Local Churches, c. 1000”. As neatly described in the title, it contains a list of 144 churches in the diocese of Autun, France, which was made around the year 1000. An example of one of the churches, the Church of Saint Martin in Cordesse, can be seen in the photo below.

Photo of the Church of Saint Martin in Cordesse, France.

According to the item’s description: “The dataset provides the names in the list, the modern place-names, the departement these places are located in, their order in the original list, whether each church is attested in earlier documentation or not, and if so, approximately when.”

The item took on a new life when it was shared on Twitter (now known as X), where a user, William J.B. Mattingly, took the dataset and added latitudinal and longitudinal data to create a mapped visualisation shown in a video. This reuse is documented in the Altmetrics of the item, which details how a DataShare item has been shared or cited. It is also a neat demonstration of how data shared on DataShare can be reused in useful and creative ways!

The DataShare item can be found here: https://doi.org/10.7488/ds/7774

The Tweet with the data visualisation can be found here: https://x.com/wjb_mattingly/status/1813587749905072497

Keith Munro,
Research Data Support Assistant

RESPIRE Fellowship

Posted on by
Reply

This is a guest blog post from Tapas K Mohanty, Informatics & Data Science Liaison Officer for the RESPIRE project, who recently dropped by for a visit. Tapas, who is based at the KEM Hospital Research Centre in Pune, India, was here on a RESPIRE Fellowship to meet with his Edinburgh-based RESPIRE colleagues. Of course, he was mainly here to hang out with the cool kids: viz. Research Data Support.

If that wasn’t exciting enough, Tapas was also one the many very amazing presenters at this year’s Edinburgh Open Research Conference. Amid the whirligig of fun and excitement, he found time to jot down some thoughts on what was a Very Good Day. These are they:  

Wednesday 29th May: a good start. Setting out for Pollock Halls, where the Open Research Conference was being held, I found Kitty Flynn, a RESPIRE colleague, on the same bus. Kitty was coming along to cheer me on during my presentation.

The conference opened with a thought-provoking Plenary Panel featuring Nick Wise, Rowena Lamb, Malcolm MacLeod, and Katie Nicoll Baines. Together, they explored the intersection of research culture change and Open Research. Key considerations included the delicate balance between policies and international collaboration. Notably, while discussing the legacy of racism in scholarly research institutions, the panel acknowledged its existence and advocated for a shift from blame-culture to accountability as the only way to effect real change.

Photo of the Plenary panel discussion with attendees in the foreground.

Plenary panel discussion – Photo credit: Tapas K Mohanty

Session One focused on Education, Skills, and Recognition. Lee Murphy opened the session with a technician’s viewpoint on the dominant academic perspective, which rarely credits technical support staff. Second was Haley Eckel, who described the introduction of Data Management Plan requirements for PhD students at the University of St Andrews. Third and last, Nik Tahirah Nik Hussin & Veronica Cano talked about the Contributor Roles Taxonomy (CRediT).

Next came the lightning talks, with me as the first presenter. Stepping up to the microphone, my heart raced and my throat felt dry. Brittany (another presenter) reassured me. Nervously, I wondered if I could finish within 5 minutes. My subject was an Open-Source Hardware initiative to enhance MRI accessibility in India’s low-resource areas. Ignited by last year’s Open Research Conference, the project will be hosted by Pune’s KEM Hospital Research Centre with support from PTB, Berlin, and GOSH (Gathering for Open Science Hardware). Utilising open-source designs, the initiative seeks to expedite the diagnosis of traumatic brain injuries in rural regions, ensuring essential medical technology is available wherever it’s needed.

The other speakers in this session were:

  • Nicola Osborne, ‘Nurturing responsible data practices in creative industries R&D through applied ethics and open research practices.’
  • Rachel Steeg, ‘Making iPSCs FFAIR.’
  • Tom Morley, ‘From compliance to culture: How can we address the barriers that are preventing a culture of Open Research in relation to Open Monographs?’
  • Dominic Hewett, ‘Humanities researchers’ perspectives towards scholarly communication practices’
  • Brittany Blankenship (on behalf of Kasia Banas), ‘See one, do one, teach one: Teaching Open Research Skills for Data-Driven Innovation in Health and Social Care.’

Stuart King opened the final session on Next Generation Metrics and Recognition with a talk on preprints and reimagined of peer review. Lucy Woolhouse followed, returning us  to the topic of credit and attribution. The legendary Marta Teperek came next, outlining the Netherlands’ strategic investment in Open Science, an investment that seeks to cultivate a research environment which prioritizes quality, equity, and inclusivity. Marisa De Andrade closed the session by challenging traditional research metrics through the lens of her new book on knowledge justice. She argued for methodologies that consider the lived experiences of marginalized communities and promote research that tackles inequalities.

The conference closed with a poster session in which presenters delivered one-minute, rapid-fire talks on their posters.

I can honestly say that this trip to attend the Open Research Conference will forever be in my memory. I will always remember the presentations and the people I was able to meet. It was an exciting day for new learning and it left the mark of an enriching experience.

Edinburgh Open Research Conference 2024

Posted on by
Reply

This is a guest blog post from Emma Wilson, Emma is a final year PhD student in the Centre for Clinical Brain Sciences. She is currently interning with the Library Open Research Team.

On 29th May 2024, we held the third annual Edinburgh Open Research Conference online and in person at the John McIntyre Conference Centre. Over 300 people attended the hybrid event, from Edinburgh and further afield, to listen to a jam-packed programme of talks and posters on all things open research.

This year’s theme was culture change, and thinking about how open research principles can steer us towards healthy and inclusive research environments.

Panel host Dominic and panel speakers Rowena, Nick, Katie, and Malcolm sit on a stage in front of the conference audience

Plenary panel – photo credit: Eugen Stoica

The events kicked off with a plenary panel featuring Nick Wise (University of Cambridge), Rowena Lamb, Malcolm Macleod, and Katie Nicoll Baines (all University of Edinburgh) discussing the ways in which we can drive healthy and sustainable culture change and how this applies in the context of open research.

Marisa de Andrade delivering her keynote

Marisa de Andrade delivering her keynote – photo credit: Eugen Stoica

Presentations and lightning talks touched on the topics of education and skills, research culture change, and next generation metrics. We heard from a diverse range of perspectives including technicians, researchers in both STEM and the humanities, and professional services staff. Equality, diversity, and inclusion (EDI) was a strong theme running throughout each of the presentations.

The keynote lecture was delivered by Marisa de Andrade on ‘The Madness of Metrics and Possibilities of Pause in Open Research’, which offered perspective on research metrics, what they really mean, and what really matters.

Maria Juliana Rodriguez Cubillos presenting her poster during the drinks reception

Poster session – Photo credit: Eugen Stoica

Following a busy day, the conference closed with a drinks reception and posters. Each presenter gave a quick-fire summary of their poster in a round of ‘Minute Madness’.

We want to thank everyone who attended the conference, our fantastic presenters, and of course our organisers Kerry Miller and Nel Coleman for making the day enjoyable and insightful. And if you missed it, be sure to come along next year!

Stay up to date on open research activities and future conference announcements by signing up to the Edinburgh Open Research Newsletter and joining our Edinburgh Open Research Initiative Microsoft Teams group.