Category Archives: Open Research

New feature: Sharing DataVault data with an external user

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By popular demand, the Research Data Service is pleased to announce the arrival of a brand new feature: the DataVault Outward Staging Area (DOSA), a free-of-charge benefit to DataVault depositors.

Engraving depicting a stagecoach with people in front of a building

What is a staging area? Somewhere your data can be held temporarily, on the way to somewhere else. Just like a traditional staging post for stagecoaches, as shown in this engraving.

Imagine: your multi-terabyte dataset is safe-and-sound in your vault, you’ve cited it in a paper you’ve just published, and an external researcher has asked you for a copy. What will you do?

Simple: send a request to IS Helpline (or data-support@ed.ac.uk) asking us to create a DOSA folder for your data.

We’ll then use DOSA to give temporary (two months) external access to a copy of your deposit, using a Globus FTP endpoint. We’ll retrieve a copy of your data to the folder. And we’ll provide you with the Globus endpoint, which you send to the researcher. They may need to install some software to get the data. Alternatively, for datasets under 500 GB, we suggest a DataSync link will be more suitable. We set that up and provide it to you in the same way as the Globus endpoint. The difference for the end user is they can use the DataSync link (+ password) from their browser. Let us know if you have a preference for a Globus endpoint or a DataSync link (otherwise we’ll decide automatically based on the size).

 

Workflow diagram showing data moving from DataVault into DOSA, and from DOSA out to DataSync or globus

Workflow: We retrieve your deposit to your DOSA folder. We provide you with either a Globus endpoint or a DataSync link, to provide to your external person who made the request.

The DOSA is part of our networked active data storage, DataStore, but separate from the other staging area we provide for users making a new deposit (‘the DataVault staging area’), for the inward route.

Since 2016 researchers have been archiving data in Edinburgh DataVault. The DOSA is available for any DataVault deposit, old or new.

DataVault Outward Staging Area (DOSA): Sharing data with an external user

Not sure you’ll remember the name of the service? Worry not! I have a mnemonic device for you: just remember that a ‘dosa’ is an Indian savoury pancake. What’s not to like?

Photo of a folded dosa pancake on a tray with dishes of savoury sauces.

Pauline Ward
Data Repository Operations Officer
University of Edinburgh

Open Research Support at Russell Group Universities

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As part of my work as Research Data Steward, I was asked by our Open Research Co-ordinator to investigate the open research support available at Russell Group universities and how the University of Edinburgh compares.[1] Open research, which is also known as “open science” or “open scholarship”, refers to a collection of practices and principles around transparency, reproducibility and integrity in research. To understand to what extent Russell Group universities have adapted to the ongoing development of open science, we have conducted analysis in terms of four areas. Do they have a published policy around Open Research? Do they have an Open Research Roadmap? Do they mention any training or specific support for researchers in achieving Open Research? What services do they provide to support Open Research?

Firstly, we checked whether those universities have a policy/statement that outlines the university’s approach to support open research and key principles for researchers. Less than 30% of these universities have a clear policy or statement for Open Research. Good examples include the University of Cambridge,[2] University of Sheffield,[3] and Cardiff University.[4]

Secondly, we checked whether they have a Roadmap that provides a set of questions that universities can use to monitor their progress in implementing Open Science principles, practices and policies at a local level. Among the Russell Group members, University of Edinburgh and University College London – two members of the League of European Research Universities (LERU) – [5] provide a roadmap/page dedicated to monitor their progress. (Ours can be found on this Open Research page.)

Facets of open researchThirdly,what services are provided to researchers to make their work public? Most universities provide support like a data repository (except for LSE), Research Data Management support, Open Access to publications and thesis and guidance on sharing research software. A few provide support on protocols sharing. Some universities have started hosting an open research conference. For example, UCL Open Science Conference 2021, 2022,[6] Open Research Symposium hosted by the University of Southampton,[7] and University Open Research Conference, June 2021, at the University of Birmingham.[8] As an active member of LERU, our university also joined in to launch our first Edinburgh Open Research Conference in May, 2022.

Lastly, we have found all universities have training relevant to open research, with around half of them clearly advertising their training. Some good examples which we could learn from include the “Open Research education for doctoral students” from Imperial College[9]  and a practical libguide for open research provided by the University of York[10].

We are glad to see that Russell Group members have started adopting actions to support Open research, which is considered part of the new normal for research-intensive universities. However, this is a long and ongoing process. We have seen that many universities are still in the early stages of the implementation process and more can be done to advance their practice, including ours.

Yue Gu
Research Data Steward

Footnotes
[1] https://russellgroup.ac.uk/about/our-universities/
[2] https://osc.cam.ac.uk/open-research-position-statement
[3] https://www.sheffield.ac.uk/openresearch/university-statement-open-research
[4] https://www.cardiff.ac.uk/documents/2519297-open-research-position-statement
[5] https://www.leru.org/publications/implementing-open-science
[6] See the UCL Blog post for more information. https://blogs.ucl.ac.uk/open-access/2022/03/15/bookings-now-open-for-ucl-open-science-conference-2022/
[7] https://library.soton.ac.uk/openaccess/Plan_S_open_research_symposium
[8] See https://intranet.birmingham.ac.uk/as/libraryservices/library/research/open-research.aspx
[9] https://www.imperial.ac.uk/research-and-innovation/support-for-staff/scholarly-communication/open-research/open-research-education/
[10] https://subjectguides.york.ac.uk/openresearch/home

Edinburgh Open Research Conference Proceedings

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EOR logoOne of the ambitions for the EOR conference held in March, 2022, when we first started planning it was to make it as open and accessible as possible. To achieve this we made the whole event hybrid so that plenary talks, posters, and workshops were all accessible on the day to both in person and remote attendees. While this generally worked very well for both remote and in-person attendees, we also wanted to make it available to people who couldn’t attend on the day – so we recorded everything, and the recordings of the talks and posters can now be openly accessed through our Edinburgh Open Research journal at http://journals.ed.ac.uk/eor.

Kerry Miller
Research Data Support Officer & Open Research Co-Ordinator
Library Research Support

First Edinburgh Open Research Conference: March 27th 2022

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On this day in history, Kerry Miller (Library Research Support) and Laura Klinkhamer (Edinburgh Open Research Initiative and ReproducibiliTea) delivered a packed programme of speakers, workshops, and poster presentations.

Attendees online and in person were treated to a fine and varied selection of talks. To begin with, topics ranged from Gavin McLachlan’s overview of current national and international political contexts and Dominic Tate’s review of the University’s Open Research Roadmap, to the latest in open access publishing from Rebecca Wojturska and Dominique Walker, FAIR principles from Susanna-Assunta Sansone, and Eugenia Rodrigues on inclusivity and Citizen Science.

Other speakers – Malcolm Macleod, Jane Hillston, Alan Cambell, and Stephen Curry – focused on research culture and integrity. Notably, they reminded us that open practices aren’t just essential for replication and verification, they might also help in dealing with all kinds of bad behaviour: bullying, harassment, perhaps even research misconduct. As one would expect, the need to incentivise and reward openness was also a hot topic. Not a bad idea, especially if the aim is to change people’s behaviour for the better.

The session on training and education was particularly interesting, especially the middle two presentations, both of which focused on openness and pedagogic practice. First, Madeleine Pownall presented a synthesis of evidence relating to impact on student outcomes. Her findings suggest that exposure to open practices can improve scientific literacy, critical thinking, and core competencies, including understanding statistics and research methods.

Nicely complementing Madeleine’s study, Emma MacKenzie and Felicity Anderson gave us the benefit of hands-on experience. Speaking from either side of the student-supervisor relation, they described their use of open source tools, materials, and mind-sets in student projects. Here, too, we saw the development of core competencies, this time including the documentation, discussion, and resolution of errors.

The lessons from all three presenters are clear enough: make the resources of scholarly research accessible and students will engage with them enthusiastically, intelligently, and with self-awareness. Just imagine what might be achieved should such attitudes ever escape the classroom and reach the wider world.

There were also poster sessions, culminating in first prize for Livia Scorza’s ‘Not going to waste – preserving Scotland’s COVID-19 waste water data,’ and there were workshops covering everything from public engagement to Open Research and AI.

The event concluded with a well-deserved show of appreciation for our organisers, Kerry and Laura. Meanwhile, everyone agreed that the day had been a lot of fun and educationally valuable. To see the ties between Open Research, Integrity, and Research Culture being drawn ever closer was both fascinating and encouraging; likewise, the enthusiasm for embedding openness in the student experience.

Best of all, however, it was good to be there in person, especially after the last two years. Speaking to real people and seeing others speak in all three available dimensions was really a very pleasant reminder of what it’s like to be a human being.

Simon Smith
Research Data Support Service

Photographs by Eugen Stoica: ES CC-BY 4.0